BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005C12LP1|AL425358
(1007 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1444 1974 0.0
>3x_Contig1444
Length = 7580
Score = 1974 bits (993), Expect = 0.0
Identities = 1003/1007 (99%), Gaps = 1/1007 (0%)
Strand = Plus / Minus
Query: 1 aactggataaacgtaataaaatgggaaaagcataggcgaaaatggatcaggaagtgtagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2531 aactggataaacgtaataaaatgggaaaagcataggcgaaaatggatcaggaagtgtagt 2472
Query: 61 aataaggataacgaggtgatgaaaaccaaaagatttgatgcaacattcgtaaatyagaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2471 aataaggataacgaggtgatgaaaaccaaaagatttgatgcaacattcgtaaattagaaa 2412
Query: 121 ctgctccaagaccaatcagcaggaacacytcctacaatattttccaagtgctgccgttgg 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2411 ctgctccaagaccaatcagcaggaacacttcctacaatattttccaagtgctgccgttgg 2352
Query: 181 tttacactaccctcagtaccatttaatgcttcgtctatatttcttcctgttgcgggtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2351 tttacactaccctcagtaccatttaatgcttcgtctatatttcttcctgttgcgggtttt 2292
Query: 241 ggcaaattgagtagtgtgttagaatggtttccactattttcattttcattttcacgaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2291 ggcaaattgagtagtgtgttagaatggtttccactattttcattttcattttcacgaatc 2232
Query: 301 gaaccagaatgtgatgaagaagttgaggaagtagaagtagaaggtggttgctgctgctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2231 gaaccagaatgtgatgaagaagttgaggaagtagaagtagaaggtggttgctgctgctgc 2172
Query: 361 tgttgcaattctgcctgatctttggcgggtccagccttaaccagagtgtcatattcatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2171 tgttgcaattctgcctgatctttggcgggtccagccttaaccagagtgtcatattcatct 2112
Query: 421 aagcmactgtcacatattttagatagcacgcctaaccctccacaaccaatgataaacttg 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2111 aagcaactgtcacatattttagatagcacgcctaaccctccacaaccaatgataaacttg 2052
Query: 481 gcgttagggtttaagtatagccagtgtctgacatgttgctggcaaaagatatcaccgcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2051 gcgttagggtttaagtatagccagtgtctgacatgttgctggcaaaagatatcaccgcaa 1992
Query: 541 tgcctgcagtgatgttttctttcccagaacgtgaaaattttgtgacagtatttacaagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1991 tgcctgcagtgatgttttctttcccagaacgtgaaaattttgtgacagtatttacaagaa 1932
Query: 601 tgacgtttggaatctggaatccagtgctctttggtgggttgaatcaattgtaattgcaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1931 tgacgtttggaatctggaatccagtgctctttggtgggttgaatcaattgtaattgcaga 1872
Query: 661 tccctttcattacacagccaggattgaattttgtttctataagtgctcacaatggatgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1871 tccctttcattacacagccaggattgaattttgtttctataagtgctcacaatggatgat 1812
Query: 721 gtggtagaatgaatacttctggcgtaatttgaattggaagtgttcgaatgtttagacagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1811 gtggtagaatgaatacttctggcgtaatttgaattggaagtgttcgaatgtttagacagc 1752
Query: 781 acagcttgtaaagttgtttgtgttacatcagatggtgtaggagaatgtgacttcaaatct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1751 acagcttgtaaagttgtttgtgttacatcagatggtgtaggagaatgtgacttcaaatct 1692
Query: 841 tctatctttatgttcgtctcagaaatgtctctcaacactgcaggaacatacatcggtttc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1691 tctatctttatgttcgtctcagaaatgtctctcaacactgcaggaacatacatcggtttc 1632
Query: 901 ttcggttcgttaatctgctgtaagagtctcttcgagttagatgaggctgtactattggaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1631 ttcggttcgttaatctgctgtaagagtctcttcgagttagatgaggctgtactattggaa 1572
Query: 961 caaatgcccttagcttcgttgaaattatgagacg-tccatgtaaagt 1006
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1571 caaatgcccttagcttcgttgaaattatgagacgttccatgtaaagt 1525
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8564
Number of Sequences: 1807
Number of extensions: 8564
Number of successful extensions: 159
Number of sequences better than 1.0e-20: 1
length of query: 1007
length of database: 10,358,551
effective HSP length: 16
effective length of query: 991
effective length of database: 10,329,639
effective search space: 10236672249
effective search space used: 10236672249
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)